In an article from Vintage Guitar magazine, John Frusciante's 1962 Fender Jaguar in Fiesta Red finish (with matching headstock) is mentioned. When talking about his favorite instruments from his collection, he says:

"I’ve had most of these guitars for a really long time. When I rejoined the Chili Peppers, I just had one guitar – the red Jaguar. I started collecting and my friend, Vincent Gallo, helped me find a lot of guitars."

The actual guitar is pictured, with the following caption:

This 1962 Fender Jaguar in Fiesta Red is the guitar Frusicante has owned longer than any other.

Frusciante himself mentions this guitar, though there is an interesting inconsistency between what Vintage Guitar magazine says, in that Frusciante says it is from 1961:

"I love Fender Jaguars. The guitar I’ve owned the longest is a red Jaguar from around ’61. It has a matching headstock."

Original article can be found here.

Well on another page I read he's playing a Jazzmaster since 2008. But I saw him in 2017 at Rock Werchter in Belgium, and he was playing a Fender Black Jaguar (not sure which year). I added a video on YouTube, could someone help me to complete this ? 19:03 In 'Airbag' he's using it. I'm sure it's a Jaguar because of the gimmicky switches every where around the body.

My 1962 Fender Jaguar that I use with The Cribs and Modest Mouse. www.johnny-marr.com/guitarchestra-2/1962-fender-jaguar

The Edge has been seen playing this Fender Jaguar in Lake Placid Blue with a painted matching headstock and gold hardware. It is believed to be a 1962 vintage.

At about 14:06 in this video, Joe talks about how he got his 1962 Fender Fiesta Red Jaguar.

Josh Klinghoffer used a 1962 Fender Jaguar as a backup guitar during The Bicycle Thief's 1999-2000 tour, as shown in a user-uploaded photo on TinyPic.

Paul Banks of Interpol can be seen in this photo playing a black1962 Reissue Jaguar, rosewood fretboard, with a black pickguard and black pickups. At first glance it seems like it could be a black HH model (Blacktop Jaguar HH or Special Edition Jaguar HH), but the floating tremolo prevents it from being that specific one.

In an interview, Paul Banks talks about why he plays Fender Jaguars:

The Jaguars are, I think, because of Kurt Cobain and John Frusciante as a child. I happened upon my Les Paul, which also suited me because I'm a big Neil Young fan. But that came about from a trade, or I got it for a song, from a good friend of mine in high school. But it wasn't a guitar that I had gone to a store and picked. It's that I saw it and said, "Fuck, will you sell me that please?"

Alongside that has always been an inclination to play a Jaguar, basically, because, as I mentioned, Frusciante and Kurt; whether or not those guys used Mustangs, I don't care. I love the Jaguar. On another side, I've always been sort of a strummy, primarily rhythm guitar player. I'm only a rhythm guitar player. There's a reason why the Rapture uses thin-stringed kind of Fender guitars with that sound, that kind of funk, disco sound. It's made for a Fender, and a beefier, moody sound, I think, is made with a Les Paul.

A lot of the kind of guitar playing I do is rhythm oriented, so I like, once in a while, going over to the Fender side because the neck is thinner, and it's like a less percussive, more rhythmic thing. Also, I feel like the Les Paul suits Interpol. The Jaguar actually came about specifically within Interpol because I had written a part in which I wanted whammy, and I don't like Les Pauls with Bigsbys. I had just got a guitar that had a whammy bar.

(source here, published November 2012)

In the YouTube video "HOMESHAKE live @ Wonderland" by Drew Price, a band member is seen playing a 1962 Fender Jaguar in black.

you'll see the Fender 1962 Jaguar at 1:32

Greenway can be seen playing a Fender Jaguar in this photo.

Can be seen on headstock at 2:16

In this Youtube video at 0:18, Josh explains he's playing with a 1962 Fender Jaguar electric guitar.